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Chromium in PDB 6jmw: Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan

Enzymatic activity of Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan

All present enzymatic activity of Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan:
1.14.14.1; 1.6.2.4;

Protein crystallography data

The structure of Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan, PDB code: 6jmw was solved by J.K.Stanfield, K.Omura, C.Kasai, H.Sugimoto, Y.Shiro, Y.Watanabe, O.Shoji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.02 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.032, 148.362, 63.524, 90.00, 98.04, 90.00
R / Rfree (%) 18.3 / 22.1

Chromium Binding Sites:

The binding sites of Chromium atom in the Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan (pdb code 6jmw). This binding sites where shown within 5.0 Angstroms radius around Chromium atom.
In total 2 binding sites of Chromium where determined in the Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan, PDB code: 6jmw:
Jump to Chromium binding site number: 1; 2;

Chromium binding site 1 out of 2 in 6jmw

Go back to Chromium Binding Sites List in 6jmw
Chromium binding site 1 out of 2 in the Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan


Mono view


Stereo pair view

A full contact list of Chromium with other atoms in the Cr binding site number 1 of Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cr501

b:19.3
occ:1.00
CR A:BW9501 0.0 19.3 1.0
ND A:BW9501 2.0 16.2 1.0
NB A:BW9501 2.0 20.3 1.0
NC A:BW9501 2.1 21.0 1.0
NA A:BW9501 2.1 18.4 1.0
SG A:CYS400 2.3 20.5 1.0
O A:HOH769 2.4 24.4 1.0
C1D A:BW9501 3.0 19.5 1.0
C4D A:BW9501 3.0 20.1 1.0
C1B A:BW9501 3.0 21.3 1.0
C4C A:BW9501 3.1 20.6 1.0
C4B A:BW9501 3.1 21.8 1.0
C4A A:BW9501 3.1 19.2 1.0
C1A A:BW9501 3.1 19.0 1.0
C1C A:BW9501 3.1 22.0 1.0
CB A:CYS400 3.3 19.6 1.0
CHD A:BW9501 3.4 19.6 1.0
CHB A:BW9501 3.4 20.9 1.0
CHA A:BW9501 3.4 18.5 1.0
CHC A:BW9501 3.5 21.0 1.0
CA A:CYS400 4.0 19.5 1.0
C2D A:BW9501 4.2 19.1 1.0
C3D A:BW9501 4.3 19.2 1.0
C3B A:BW9501 4.3 21.9 1.0
C3C A:BW9501 4.3 20.7 1.0
C2B A:BW9501 4.3 19.7 1.0
C2C A:BW9501 4.3 22.6 1.0
C3A A:BW9501 4.3 19.3 1.0
C2A A:BW9501 4.3 20.1 1.0
CB A:ALA264 4.8 30.9 1.0
C A:CYS400 4.8 18.8 1.0
N A:GLY402 4.8 20.3 1.0

Chromium binding site 2 out of 2 in 6jmw

Go back to Chromium Binding Sites List in 6jmw
Chromium binding site 2 out of 2 in the Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan


Mono view


Stereo pair view

A full contact list of Chromium with other atoms in the Cr binding site number 2 of Structure of the Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cr501

b:20.5
occ:1.00
CR B:BW9501 0.0 20.5 1.0
NB B:BW9501 2.0 17.1 1.0
ND B:BW9501 2.1 17.1 1.0
NC B:BW9501 2.1 21.4 1.0
NA B:BW9501 2.1 19.8 1.0
SG B:CYS400 2.3 18.9 1.0
O B:HOH762 2.4 21.1 1.0
C1C B:BW9501 3.1 20.5 1.0
C4B B:BW9501 3.1 21.7 1.0
C1B B:BW9501 3.1 21.1 1.0
C4A B:BW9501 3.1 20.8 1.0
C4D B:BW9501 3.1 18.3 1.0
C1D B:BW9501 3.1 18.9 1.0
C4C B:BW9501 3.1 21.0 1.0
C1A B:BW9501 3.1 18.7 1.0
CB B:CYS400 3.3 18.9 1.0
CHC B:BW9501 3.4 22.2 1.0
CHB B:BW9501 3.4 20.4 1.0
CHA B:BW9501 3.4 20.4 1.0
CHD B:BW9501 3.5 21.6 1.0
CA B:CYS400 4.0 19.1 1.0
C3B B:BW9501 4.3 20.6 1.0
C2C B:BW9501 4.3 22.8 1.0
C3C B:BW9501 4.3 21.1 1.0
C3A B:BW9501 4.3 19.4 1.0
C2A B:BW9501 4.3 19.2 1.0
C2B B:BW9501 4.3 18.7 1.0
C2D B:BW9501 4.3 18.2 1.0
C3D B:BW9501 4.3 17.6 1.0
CB B:ALA264 4.8 33.4 1.0
C B:CYS400 4.8 19.8 1.0
N B:GLY402 4.9 20.4 1.0

Reference:

O.Shoji, J.K.Stanfield. Structure of Chromium Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan at 1.85 Angstrom Resolution To Be Published.
Page generated: Sun Dec 13 10:55:16 2020

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